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Am J Physiol Renal Physiol 277: F587-F598, 1999;
0363-6127/99 $5.00
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Vol. 277, Issue 4, F587-F598, October 1999

Ksp-cadherin gene promoter. I. Characterization and renal epithelial cell-specific activity

Dilys A. Whyte1, Congyi Li2, R. Brent Thomson2, Stacey L. Nix2, Reza Zanjani2, Sharon L. Karp4, Peter S. Aronson2,3, and Peter Igarashi2,3

Departments of 1 Pediatrics, 2 Internal Medicine, and 3 Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520; and 4 Department of Medicine, Indiana University School of Medicine, Indianapolis, Indiana 46202

Kidney-specific cadherin (Ksp-cadherin, cadherin 16) is a novel, kidney-specific member of the cadherin superfamily that is expressed exclusively in the basolateral membrane of renal tubular epithelial cells. To characterize the Ksp-cadherin gene promoter, a lambda  bacteriophage clone containing 3.7 kb of the proximal 5' flanking region of the mouse Ksp-cadherin gene was isolated. The transcription initiation site was mapped by RNase protection assays and 5' rapid amplification of cDNA ends, and a 709-bp intron was identified within the 5' untranslated region. The proximal 5' flanking region was "TATA-less" but contained other consensus promoter elements including an initiator (Inr), GC boxes, and a CAAT box. Potential binding sites were identified for transcription factors that are involved in tissue-specific gene expression including activator protein-2 (AP-2), hepatocyte nuclear factor-3 (HNF-3), basic helix-loop-helix (bHLH) proteins, CCAAT/enhancer-binding protein (C/EBP), and GATA factors. Transfection of luciferase reporter plasmids containing 2.6 kb of the 5' flanking region markedly increased luciferase activity in renal epithelial cells (MDCK and mIMCD-3) but not in mesenchymal cells (NIH 3T3 and MMR1). Deletion analysis identified an 82-bp region from -31 to -113 that was essential for promoter activity in transfected renal epithelial cells. Electrophoretic mobility-shift assays showed that mIMCD-3 cells contain nuclear proteins that bind to this region of the promoter. Mutational analysis showed that sequences within the HNF-3 consensus site and CAAT box were involved in protein binding and promoter activity. We conclude that the proximal 5' flanking region of the mouse Ksp-cadherin gene contains an orientation-dependent promoter that is kidney epithelial cell specific. The region of the promoter from -113 to -31 is required for transcriptional activity and contains binding sites for nuclear proteins that are specifically expressed in renal epithelial cells.

kidney specific; gene regulation; transcription factor; cell adhesion


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