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1Department of Toxicology, College of Pharmacy, University of Louisiana Monroe, Monroe, Louisiana; 2Department of Cellular and Integrative Physiology, Indiana University School of Medicine, Biotechnology Research and Training Center, Indianapolis, Indiana; and 3School of Biomolecular Sciences, Liverpool John Moores University, Liverpool, United Kingdom
Submitted 6 March 2007 ; accepted in final form 6 June 2007
| ABSTRACT |
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10-fold) in all the treatment groups and they were conclusively identified by liquid chromatography tandem mass spectrometry. These proteins were mildly downregulated after low dose alone and in autoprotected mice in contrast to severe downregulation with high dose alone. Glucose-regulated protein 75 and proteasome
-subunit type 1 were further investigated by immunohistochemistry for their localization in the kidneys of all the groups. These proteins were substantially higher in the proximal convoluted tubular epithelial cells in the low-dose and autoprotected groups compared with high-dose alone group. Proteins involved in energetics were downregulated in all the three groups of mice, leading to a compromise in cellular energy. However, energy is recovered completely in low-dose and autoprotected mice. This study provides the first report on proteomics of DCVC-induced ARF and autoprotection in mice and reflects the application of proteomics in mechanistic studies as well as biomarker development in a variety of toxicological paradigms.
autoprotection; DCVC-induced renal failure; glucose regulated protein 75; proteasome
-subunit type 1
Previously, we have shown that proximal tubular injury initiated by a lethal high dose of DCVC progresses because cell division and renal tissue repair are inhibited, leading to ARF and death in mice (64). Proximal tubular injury initiated by low to moderate doses of DCVC is repaired by timely and adequate stimulation of cell division and renal tissue repair, restoration of renal structure and function, and survival of mice by averting ARF-bound injury.1 Nephro-autoprotection is characterized by prior administration of a low dose of DCVC, which primes renal cell division such that tissue repair is no longer inhibited even after exposure to a normally lethal dose of DCVC (28, 64, 65). The critical role of cellular signaling mechanisms in stimulating renal cell division and sustaining renal tissue repair in the autoprotection model has been documented (27, 28, 66). However, understanding compensatory mechanisms other than cell division is also important to identify and profile the critical molecular biomarkers of renal injury and repair following ARF-bound injury to develop potential therapeutic measures.
Proteomic studies are envisioned to help in the translation of genomics to clinically useful applications, especially in the areas of diagnostics and prognostics (41, 70). In the diagnosis and treatment of kidney disease, the identification of disease-associated early biomarkers is a major priority. Proteomics, with its high-throughput and unbiased approach to the analysis of variations in protein expression patterns, promises to be the most suitable platform for biomarker discovery (34, 40, 42, 74). Combining such classic analytic techniques as two-dimensional gel electrophoresis with more sophisticated techniques, such as mass spectrometry (MS) has made it possible to catalog and quantify proteins present in urine and various kidney tissue compartments in both normal and diseased physiological states. However, information on proteins associated with injury and recovery mechanisms following ARF-bound injury in appropriate animal models is scarce. The present study presents for the first time proteomic profiling of various proteins following DCVC-induced renal damage and autoprotection in mice.
| METHODS |
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Animals and treatment. Male Swiss Webster (SW) mice (25–29 g) were purchased from Harlan Sprague-Dawley (Indianapolis, IN) and were maintained in our central animal facility under 21 ± 1°C temperature and 50 ± 10% relative humidity at all times. They were maintained on a 12:12- h light-dark cycle over wood chips free of any known chemical contaminants. The mice received commercial rodent chow (Teklad rodent diet 7012) and water ad libitum and were acclimated for 1 wk before use. All animal maintenance and treatment protocols were in compliance with the Guide for the Care and Use of Laboratory Animals as adopted and promulgated by the US National Institutes of Health and were approved by our Institutional Animal Care and Use Committee.
Lethality study. To confirm our previous findings, a lethality study was conducted with mice which were divided into four groups (n = 10/group). Mice in groups I and III were injected with distilled water (DW; 10 ml/kg) on day 0 followed by DW (10 ml/kg; group I) or high-dose DCVC (75 mg/kg ip; group III) in DW (10 ml/kg) at 72 h, respectively. Groups II and IV received low-dose DCVC (15 mg/kg ip) in DW (10 ml/kg) on day 0 followed by either 10 ml/kg DW ip (group II) or high-dose DCVC (75 mg/kg ip) in DW (10 ml/kg) at 72 h (group IV; autoprotection group), respectively. Mice were observed twice daily for 14 days, and survival/mortality data were recorded. All deaths occurred between 36 and 48 h after the high dose of DCVC in group III.
Time course study. A separate study was conducted with mice from groups I, II, III, and IV. Groups I, II, and IV had three mice per time point (n = 3). Group III consisted of five mice to ensure a minimum of three surviving mice, because mice started dying between 108 and 120 h (36–48 h after the high dose) in the lethality experiment (Table 1). Mice were terminated under diethyl ether anesthesia at 6, 12, 24, 36, 72, 78, 84, 96, 144, 240, and 336 h after the low-dose administration in groups II and IV. Mice in group III (n = 3/time point) were terminated after the administration of DW at 6, 12, 24, 36, 72, 78, 84, 96, and 108 h. Plasma was collected from mice at each time point to assess renal function. Kidneys were also isolated from these mice at each time point after respective treatment for further analysis of renal ATP content, histopathology, and immunohistochemical staining. In addition, kidneys isolated from mice in all the groups at 36 h were also used for running two-dimensional gel electrophoresis (2-DE). Previous studies have shown that 90% of the mice receiving only the high dose of DCVC (group III) die between 108 and 120 h (36–48 h after the high dose) after DW administration (64, 65). For proteomic studies, a 36-h time point after DW or DCVC was selected for 2-DE. The objective for selecting a 36-h time point after DW (group I) or DCVC (group II, second treatment of DCVC in groups III and IV) for proteomic studies was to identify key protein modifications before animal death in group III (high-dose group). In addition, we selected the same time point after high dose in group IV (autoprotected group) to examine protein modifications during recovery from DCVC-initiated injury, ARF, and death.
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Renal histopathology. Portions of the kidneys that were removed from mice at 36 h after the treatment with either DW (group I, controls) or DCVC (group II, second treatment of DCVC in groups III and IV) was used for assessing renal injury by histopathology, and the remaining kidney tissue was used to make homogenates for proteomic analysis by 2-DE and measurement of ATP content. To find whether changes in protein expression at 36 h after respective treatments with DCVC reflect renal damage, these sections were used to confirm renal damage by histopathology. Kidneys from control and treated mice were washed with ice-cold normal saline (0.9% NaCl), cut transversely into thin slices, and then fixed into 10% neutral-buffered formaldehyde for 48 h. The tissues were then transferred into 70% ethyl alcohol, processed, and embedded in paraffin wax. Kidney sections (4-µm thin) were stained with hematoxylin and eosin for histological examination under a light microscope. Three x200 microscopic fields were randomly chosen from the corticomedullary region (CMR) encompassing the outer stripe of outer medulla (OSOM) from each mouse (n = 3/group); the CMR encompassing the OSOM is the principal region of the nephron damaged by DCVC. Tubules were considered necrotic if they were lined with profiles of amorphous cells with coagulated eosinophilic cytoplasm and ghostly silhouettes of karyolitic nuclei or exfoliated cells, detritus, or both.
Sample preparation. Whole-kidney homogenates were made using kidneys that were isolated from mice at 36 h after the treatment with either DW (group I, controls) or DCVC (group II, second treatment of DCVC in groups III and IV). Kidney tissue was placed in a 50-ml beaker, along with eight volumes of a solution containing 9 M urea, 4% Igepal CA-630 ([octylphenoxy] polyethoxyethanol), 1% DTT, and 2% carrier ampholytes (pH 8–10.5), and thoroughly minced with surgical scissors. The minced samples were then placed in 3-ml DUALL (Kimble/Kontes, Vineland, NJ) ground-glass tissue grinders and manually homogenized. After solubilization at room temperature for 120 min, samples were centrifuged at 100,000 g for 30 min using a Beckman (Fullerton, CA) TL-100 ultracentrifuge to remove nucleic acid and insoluble materials; the supernatants were stored at –45°C until 2-DE separation.
2-DE. Using overnight, passive rehydration at room temperature, 500 µg protein from all the samples in all groups was loaded onto IPG strips (24 cm, nonlinear pH 3–10, Bio-Rad, Hercules, CA). Isoelectric focusing was performed simultaneously on all IPG strips randomly assigned to two Protean IEF Cells (10 strips/instrument, Bio-Rad) by a program of progressively increasing voltage (150 V for 2 h, 300 V for 4 h, 1,500 V for 1 h, 5,000 V for 5 h, 7,000 V for 6 h, and 10,000V for 3 h) for a total of 100,000 V/h. A computer-controlled gradient casting system was used to prepare second-dimension (2-D) SDS gradient slab gels (20 x 25 x 0.15 cm) in which the acrylamide concentration varied linearly from 11 to 17% T. First-dimension IPG strips were loaded directly onto the slab gels following equilibration for 10 min in Equilibration Buffer I and 10 min in Equilibration Buffer II (Equilibration Buffer I: 6 M urea, 2% SDS, 0.375 M Tris·HCl, pH 8.8, 20% glycerol, 130 mM DTT; Equilibration Buffer II: 6 M urea, 2% SDS, 0.375 M Tris·HCl, pH 8.8, 20% glycerol, 135 mM iodoacetamide). All 20 2-D slab gels were run in parallel at 8°C for 18 h at 160 V and subsequently fixed and stained using a sensitive colloidal Coomassie blue G-250 procedure (7). After 96 h, gels were washed several times with water and scanned at 95.3 µm/pixel resolution using a GS-800 Calibrated Imaging Densitometer (Bio-Rad).
Image analysis of 2-D gels.
The resulting 12-bit images were analyzed using PDQuest software (v.7.1, Bio-Rad). Background was subtracted, and protein spot density peaks were detected and counted. Because total spot counts and the total optical density are directly related to the total protein concentration, individual protein quantities were thus expressed as parts per million (ppm) of the total integrated optical density, after normalization against total image density. A reference pattern was constructed, and each of the gels in the match set was matched to the reference gel. Numerous proteins that were uniformly expressed in all patterns were used as landmarks to facilitate rapid gel matching. Significant differences in spot intensities among the selected spots were then calculated with a two-sample Student's t-test (P
0.01). Comparisons were made between pairs of groups with three gels in each group.
Among all 1,000 spots, DCVC altered 439 proteins significantly (
1.5-fold; P
0.01) compared with DW-treated controls. The data indicate that, with DCVC (in groups II, III, and IV), a total of 439 proteins were either increased or decreased (
1.5-fold change, P
0.01) compared with DW-treated controls. With the low dose (15 mg DCVC/kg ip), a total of 30 proteins were found to be modified (9 upregulated; 21 downregulated). With the lethal dose (75 mg DCVC/kg ip), a total of 210 proteins were found to be modified (84 upregulated; 126 downregulated). In autoprotected mice (group IV; 15+75 mg DCVC/kg), a total of 199 proteins were found to be modified (91 upregulated; 108 downregulated).
Liquid chromatography tandem mass spectrometry identification of proteins.
Due to voluminous data produced in these studies, for our first cut we selected those proteins that showed
10-fold change, and 18 common proteins fell into this category that were altered in all the groups (groups I, II, III, and IV) compared with controls. These 18 proteins were further excised from the gels and minced for their complete sequence identification by liquid chromatography tandem mass spectrometry (LC-MS/MS) techniques. Acrylamide pieces were rinsed with 50 mM ammonium bicarbonate/acetonitrile (1:1, vol/vol), dried, rehydrated in DTT, and alkylated with N-isopropyl iodoacetamide (100 mM in 50 mM ammonium bicarbonate). After removal of excess buffer, gel slices were dried, rehydrated in the presence of sequencing grade trypsin, and digested overnight at 37°C. Peptides were eluted using 5% formic acid/50% acetonitrile. Ion spray/nanoelectrospray MS and MS/MS measurements were performed on a Sciex API ± III LC-MS/MS triple-quadrupole instrument (PerkinElmer Biosystems and Sciex). MS results were analyzed using the MassMap (Finnigan) and Peptide-Search (EMBL) programs (54). The XCorr value is the cross-correlation value from the SEQUEST search, an index of confidence in protein identification. The avgXCorr is simply the average of all XCorr scores for multiple peptides from the identified protein (
2.5 is considered high confidence). This is all calculated in the SEQUEST(tm) software.
Glucose-regulated protein 75 and proteasome
-subunit type 1 immunohistochemistry.
Formalin-fixed, paraffin-embedded tissues were sectioned at 4 µm and placed onto slides. After being heated at 55°C for 1 h, the sections were deparaffinized in xylene and rehydrated in graded ethanols. Endogenous peroxidase activity was blocked using 3% hydrogen peroxide (H2O2) in methanol for 10 min. For antigen retrieval, specimens were microwaved in 0.01 mol/l of sodium citrate (pH 6.0) for three changes of 5 min each, followed by cooling in PBS. The sections were incubated in 3% bovine serum albumin made in PBS for 1 h at room temperature. Anti-glucose-regulated protein 75 (GRP75; Sigma) and anti-proteasome
-subunit type 1 (PSA-1; Boston Biochemical, Cambridge, MA) antibodies were applied at a 1:100 dilution, respectively, in 1% bovine serum albumin/PBS and incubated in a humidity chamber at 4°C overnight. After the primary antibody incubation, a secondary horseradish peroxidase linked anti-rabbit antibody (Amersham Pharmacia Biotech, Piscataway, NJ) was applied at a 1:100 dilution (in 1% bovine serum albumin in PBS) for 1 h at room temperature, followed by the application of diaminobenzidine with H2O2 for 10 min, according to the manufacturer's instructions. The slides were washed in DW and lightly counterstained with hematoxylin. Appropriate negative controls were maintained throughout the experiment.
Measurement of renal ATP content. Renal ATP content was evaluated over a time course by luciferase assay using a kit from Sigma-Aldrich according to the manufacturer's instructions. Immediately before the assay was performed, frozen kidney tissue of each mouse (200 mg, stored at –80°C) for each time point (n = 3) was homogenized in chilled lysis buffer and centrifuged (13,000 rpm) for 5 min at 4°C. The luciferase activity in the supernatant was evaluated in a Berthold luminometer (Berthold, Bundoora, Australia). ATP content in the samples was determined by comparison to a concurrently determined standard curve, and the results are expressed as micromoles ATP per gram kidney.
Data and statistical analysis.
Data [plasma creatinine concentration, ATP concentration, and quantitative assessment (fold-change) of the differential expression of proteins] were expressed as means ± SE (n = 3) for all the experiments. Comparison between different time points for each group was determined by one-way analysis of variance followed by Tukey's honestly significantly different and Duncan's multiple range tests using SPSS (SPSS, Chicago, IL). For image analysis, the statistical significance of differences in fold-changes between control and treatment groups at the same time point was analyzed by Student's t-test. In all cases, P
0.01 was used to determine statistically significant differences.
| RESULTS |
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Renal function. With the low dose (15 mg DCVC/kg), renal function was decreased as evidenced by plasma creatinine elevation at 36 h after dosing and then returned to normal by 72 h (Fig. 1A). With the high dose, mice experienced marked and progressive renal failure, as assessed by significant elevations in creatinine through 24–36 h (96–108 h in Fig. 1B) after 75 mg DCVC/kg. Administration of distilled water used as the vehicle for DCVC did not alter renal function (Fig. 1B). In the autoprotected mice, renal function was compromised, as evidenced by significant elevation in plasma creatinine at 24 and 36 h after the administration of a high dose of DCVC (96 and 108 h after a low dose, Fig. 1C). However, these levels were significantly lower compared with the high dose alone at the same time points (Fig. 1B). Renal function recuperates as early as 144 h (3 days after the high dose in Fig. 1C), as evidenced by low basal levels of plasma creatinine from this time point onward.
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0.01). Of these 439 proteins, with a low dose (15 mg DCVC/kg ip) a total of 30 proteins were found to be modified (9 upregulated; 21 downregulated). With a lethal dose (75 mg DCVC/kg ip), a total of 210 proteins were found to be modified (84 upregulated; 126 downregulated). In autoprotected mice (15+75 mg DCVC/kg), a total of 199 proteins were found to be modified (91 upregulated; 108 downregulated). Due to the large amount of data produced in these studies, we selected those proteins (18 proteins) that were maximally altered (
10-fold) commonly in all the groups (groups II, III, and IV) by DCVC treatment compared with controls (group I). These 18 proteins were unambiguously identified with high scores and categorized functionally as stress response and protein repair chaperones: GRP75/mortalin/heat shock protein (HSP) 74 (2942), stress-induced phosphoprotein (5812), and hemopexin (Hx; 3925); proteins involved in the elimination of glyoxal-related toxic byproducts: glyoxalase domain containing 4 (Glod4; Mus musculus) (1414); transporters: very-long-chain acyl-CoA sythetase/fatty acid transporter-2 (FATP-2; 3008); participants in protein turnover: PSA-1 (4407); translational factors: translation elongation factor (5702); free radical scavengers: peroxiredoxin-5 (PRDX5; 8151); and proteins involved in maintaining cellular energetics and ATP levels: inorganic pyrophosphatase-2 (3527), lactate dehydrogenase (LDH; 3706), 3-hydroxyanthranilate 3,4-dioxygenase isoform 1 (4418),
-enolase (ENOA; 4728), short-chain acyl-CoA dehydrogenase (ACADS; 5604), sorbitol dehydrogenase (DHSO; 5621), alcohol dehydrogenase NADP+ (AK1A1; 6514), acetyl-CoA acetyltransferase 1 (7620), pyruvate kinase isozyme M2 (KPYM, 7843), and malate dehydrogenase (MDH; 8513). The identities of all of these 18 proteins and their biochemical properties/functions are listed in Tables 2 and 3, respectively.
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Proteins involved in fatty acid transport: very-long-chain acyl-CoA synthetase or FATP-2. Image analysis of this protein in our 2-DE experiments revealed that this protein was downregulated significantly following a lethal dose of DCVC (Table 3). In contrast, in the low-dose and autoprotected groups, FATP-2 was only modestly downregulated compared with the controls (Table 3).
Proteins involved in protein turnover, translation elongation, and free radical scavenging: PSA-1, translation elongation factor, and PRDX5.
In our proteomics findings, with a low dose of DCVC, PSA-1 was upregulated moderately. In contrast, with a high dose, its expression was suppressed
11-fold compared with the controls. However, in the autoprotected mice, its downregulation was very minor compared with the high dose of DCVC alone (Table 3). These findings were confirmed by PSA-1 immunohistochemical staining in the CMR in the kidney sections (Fig. 5). PSA-1 was expressed in the inner stripe of the outer medulla also apart from the regions of damage in S3 segments of the CMR encompassing the OSOM during the course of renal injury and repair. The expression of this protein extends into the inner medulla (data not shown). However, PSA-1 localization was evident only in the regions of the OSOM, which is the primary target for DCVC. Cytoplasmic localization of PSA-1 at 24, 36, and 72 h after the low dose (Fig. 5, B–D) was slightly higher compared with normal constitutive levels at 0 h in the control mice (Fig. 5A). This expression extends into the inner medulla (data not shown). With the high dose alone, PSA-1 was severely and progressively downregulated at 24 and 36 h after the high-dose administration (Fig. 5, E and F). This finding is evidenced by lack of PSA-1-positive staining in the proximal convoluted tubular epithelial cells in the CMR surrounding the OSOM (Fig. 5, E and F). By contrast, in the autoprotected mice higher cytoplasmic expression of PSA-1 was observed in tubular epithelial cells at 24 (96 h after the low dose), 36 (108 h after the low dose), and 72 h (144 h after the low dose), respectively, after the high dose (arrows in Fig. 5, G–I) compared with lethal dose alone group.
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DCVC-induced changes in cellular energetics. Various mitochondrial precursor proteins involved in cellular respiration and ATP production are downregulated severely by the lethal dose of DCVC alone (Table 3). In contrast, in low-dose and autoprotected groups, after DCVC the downregulation of these proteins was mild to moderate (Table 3). We measured renal ATP content in mice over a time course after the administration of DCVC, at low dose, high dose, and in autoprotected mice (Fig. 6). Severe depletion of ATP was evident at 6–36 h after the high dose of DCVC (Fig. 6B). After the low dose of DCVC, renal ATP levels were maintained for 36 h, albeit with a slight but insignificant decline after dosing before dramatically declining to the lowest level by 72 h (Fig. 6A). This decline is due to utilization of energy to support replicative DNA synthesis that peaks at 72 h (63, 64) needed for tissue repair and recovery (27, 28, 63, 64). ATP content then recovered completely after an additional 36 h (108 h in Fig. 6A), and this paralleled restoration of kidney structure and function (Fig. 6A). Restoration of normal ATP levels would be expected after the replacement of lost cells with functional cells. Similarly, in the autoprotected mice, ATP content declined exactly as in the low dose alone group before recovering to normal levels after an additional 72 h after the high dose of DCVC (144 h after low dose, Fig. 6C), in stark contrast to the high dose alone-treated mice (Fig. 6B). After the high dose alone, while ATP is utilized for cellular defenses and for stimulation of unsuccessful cell division, restoration of ATP does not occur due to the lack of new cells.
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| DISCUSSION |
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We used 2-DE and LC-MS/MS to identify proteins that were differentially expressed following renal proximal tubular cell damage and ARF-bound injury initiated by the nephrotoxic cysteine conjugate DCVC in mice. We used a proteomic approach to track the key proteins that closely correspond with recovery from DCVC-initiated renal injury in the autoprotection model. We identified and functionally categorized 18 different proteins that were changed (
10-fold) by DCVC into the following categories: cellular stress response proteins; glyoxal elimination; fatty acid transport; protein repair and turnover; translation elongation factor; free radical scavenging; and cellular energetics. Our study illustrates the power of proteomics in understanding how specific pathways of injury or recovery from injury are affected by the severity of ARF. It also illustrates that new insights may be obtained into protection against progression of renal injury mediated by expression of functional proteins.
Role of stress response proteins in DCVC-induced renal damage and recovery.
High metabolic activity of proximal tubular epithelial cells in the S3 segments make them particularly vulnerable targets of necrotic or apoptotic effects of ischemia and nephrotoxicants. DCVC-induced cellular damage leads to prominent changes in stress response proteins (15). GRP75/HSP74 has multiple functions ranging from stress responses to intracellular trafficking, antigen processing, control of cell proliferation, and differentiation (5, 25, 32, 45, 71–73). After injury, GRP75/mortalin/HSP74, an important molecular chaperone of the HSP70 family (19, 35, 60), facilitates the restoration of normal function by assisting in the refolding of denatured proteins, degradation of irreparably damaged proteins and toxic metabolites, aggregation of damaged peptides, and by aiding appropriate folding of newly synthesized essential polypeptides (60). HSP90 is known to aid in the regeneration of damaged cells in the S3 segment of proximal tubules, during the course of cisplatin-induced acute tubular injury (49). HSPs (HSP25/72) are known to protect against ischemia-induced injury in the kidney (9, 16, 26, 51, 57, 68). Recently, HSP27 has been shown to be involved in the renal epithelial (LLC-PK1) cellular stress response following DCVC exposure (15). This finding is consistent with earlier observations with HSP25 and HSP72, where it was shown that renal ischemic preconditioning in mice increased the expression of HSPs (HSP25/72), offering protection against subsequent ischemia-reperfusion injury and ARF (26). Therefore, with low-dose priming, GRP75/HSP74 might not be allowing the high dose-induced cellular injury to progress either via primary induction of cytoresistance or by simultaneous enhancement of cellular repair and recovery mechanisms in the autoprotected mice. This is corroborated by renal histopathology of kidney sections taken from mice in low-dose, high-dose, and autoprotected groups (Fig. 2). The mechanism by which HSP74 prevents progression of DCVC-induced injury is unknown. However, taking together the evidence on the cytoprotective role of other HSPs from the literature and from the present findings, it may be suggested that GRP75/HSP74 is closely linked with cytoprotection. With the high dose alone, DCVC-induced stress is so intense that GRP75/HSP74 is severely downregulated and cell death is inevitable. However, exposure of cells to mild low-dose DCVC-induced stress is sufficient to induce the expression and accumulation of GRP75/HSP74, which protects against a subsequent challenge from high dose-induced stress in the autoprotected mice. This is evident by only moderate downregulation of GRP75/HSP74 after the high dose in autoprotected mice compared with severe downregulation observed in nonprimed mice challenged with high dose alone. Therefore, GRP75/HSP74 might be involved in survival of the damaged cells, and the next investigative challenge will be to define the regulatory pathways of the GRP75/HSP74 cellular stress response in DCVC-induced autoprotection and ARF. Due to large amounts of data produced by these studies, only the maximally altered 18 proteins (
10-fold by DCVC treatment) commonly in all the groups (low-dose, high-dose, and autoprotected) were identified by LC/MS/MS. To avoid cost and time constraints in this study, proteins that are maximally altered were prioritized for identification. Therefore, as of now there is a dearth of information about other HSPs with regard to whether they were altered during DCVC-induced necrosis. However, it is anticipated that there will be significant changes in other HSPs after DCVC treatment.
Stress-induced phosphoprotein-1 was shown to interact with Hsp70 and Hsp90 and facilitates transfer of substrates from Hsp70 to Hsp90 and is important for proper protein folding, maturation, and cell cycle progression (8, 22, 36, 67). We propose that severe downregulation of stress-induced phosphoprotein-1 with high dose alone might have disturbed the key interaction between stress-induced phosphoprotein-1 and various HSPs, leading to cell death, compared with sustained expression of stress-induced phosphoprotein-1 and activation of survival pathways in autoprotected mice. Hemopexin is a 60-kDa plasma glycoprotein member of the acute-phase protein family, whose synthesis may be induced by several cytokines during inflammation (3, 43). Hemopexin is involved in various biochemical processes: protection of renal tubules against hemoglobin-mediated oxidative damage (62); induction of heme oxygenase 1 (HO-1), ferritin, and metallothionein 1 (MT-1) genes that function as antioxidants (2, 56); and activation of JNK/SAPK and nuclear translocation of NF-
B (17). In the autoprotected mice, the overexpression of hemopexin was significant compared with the low- and high-dose groups (Table 3), bringing to bear all the protective effects of hemopexin in the autoprotected kidney.
DCVC and/or its metabolites are known to kill renal epithelial cells by a combination of covalent binding, depletion of nonprotein thiols, and lipid peroxidation (4, 10, 21). DCVC-induced lipid peroxidation leads to formation of various harmful physiological metabolites like glyoxal and methylglyoxal (MG) that are known to induce oxidative stress, protein glycation, and eventual cell death (53). Glyoxal and MG are detoxified by cytosolic glyoxalase system (glyoxalase I and II) to form glyoxal to glycolate and MG to D-lactate, respectively (61). The coupled reaction catalyzed by the glyoxalase system converts the electrophilic cytotoxic 2-oxoaldehydes to less reactive chemical species. Due to this, the glyoxalases are considered as part of GSH-dependent detoxifying enzymes (12). In our study, we found that Glod4 protein was severely downregulated (37.5 ± 19.6) after the high dose compared with the mice primed with a low dose of DCVC in the autoprotected group (3 ± 0.26-fold) (Table 3). As a consequence, severe downregulation of the glyoxalase system after the high dose of DCVC might fail to prevent the accumulation of toxic by-products of DCVC-induced lipid peroxidation, eventually leading to oxidative damage and compromised cell viability. In contrast, in the autoprotected mice, minimal downregulation of Glod4 after the high dose is likely to lead to the clearance of peroxidative by-products and adducts, thereby offering cytoresistance against oxidative stress and damage.
Proteins involved in fatty acid transport. FATP-2 regulates long-chain fatty acid transport across mitochondrial membranes for oxidation and release of energy in the kidney (50). With a high dose, severe downregulation of this protein leads to decreased supply of energy for the tubular epithelial cells to divide and regenerate. When the same high dose is given to primed mice, this problem no longer exists, owing to mild downregulation of FATP-2. Added to these effects, proteins involved in synthesis and maintenance of ATP are highly downregulated after the high dose, resulting in a severe compromise in cellular energy (Fig. 6). In contrast, the same proteins were mildly downregulated in the autoprotected mice (Table 3), resulting in complete recovery of ATP (Fig. 6).
Proteins involved in protein turnover, translation elongation, and free radical scavenging. PSA-1 has been shown to degrade abnormal proteins in the cytosol and nucleus through the ubiquitin-proteasome pathway (13, 20, 37, 44, 46, 47). The PSA-1 is the major neutral proteolytic apparatus in the cell and is an essential component of the ATP-dependent degradative pathway (20, 44, 46, 47). Recent findings suggest that inhibition of proteasome function leads to the accumulation of sufficient amounts of abnormal proteins and/or the inhibition of degradation of a key regulatory factor, e.g., heat-shock factor (6).
With the high dose of DCVC alone, PSA-1 was severely downregulated, which would be expected to result in the accumulation of undegraded anomalous proteins. These events are expected to lead to aberrant cellular signaling pathways, finally leading to increased cell death. However, when mice are primed with a low dose of DCVC, the protein turnover and repair would have been increased, leading to activation of cell survival pathways in autoprotected mice. This proposed mechanism is supported by the immunohistochemical finding of sustained presence of cytoplasmic and nuclear PSA-1 in the tubular epithelial cells in the autoprotected mice. Protein translation elongation factor is known to increase protein synthesis during repopulation of proximal tubules after injury by a single injection of HgCl2 (38). In our study, we found that in low-dose and autoprotected groups, translation elongation factor was moderately downregulated, whereas with a lethal dose alone it was substantially underexpressed (Table 3), suggesting inhibition of essential protein synthesis needed for cell division and tubular repopulation of epithelial cells following high dose alone-induced injury.
It was suggested that development of oxidative stress-induced injury is prevented by PRDX5 (58). Proteomic findings in the present study revealed that downregulation of PRDX5 in low-dose and autoprotection groups was minimal (Table 3), suggesting that progression of DCVC-induced oxidative damage is curbed if the animals are primed with a low dose-stimulated tissue repair.
DCVC-induced changes in cellular energetics. Mitochondria are the primary targets of DCVC, thereby decreasing cellular ATP (11, 31). However, modification of specific mitochondrial proteins involved in cellular energetics after DCVC administration in animal models has not been reported. We observed that various mitochondrial precursor proteins involved in cellular respiration and ATP production are markedly downregulated with a lethal dose of DCVC alone in contrast to low-dose and autoprotected groups after DCVC. Consequently, there was severe suppression of proteins related to electron transport and ATP synthesis in the high-dose group compared with low-dose and autoprotected groups. ATP levels never recovered in the high-dose group in contrast to low-dose and autoprotected groups. Previously, we have shown that at 72 h after the low dose of DCVC, S phase DNA synthesis and renal tissue repair are at their peak (64, 65). The rapid fall in ATP levels with a low dose of DCVC at 72 h is consistent with ATP being utilized for cell division and repopulation of tubular epithelium. Increased utilization of ATP during cell division and tissue repair is well known (59). Therefore, the decline in ATP content at 72 h after low dose alone can be attributed to robust cell division and tissue repair at 72 h in response to injury inflicted at 36 h after the low dose of DCVC alone (27, 28, 64, 65), finally leading to recovery of renal structure and function. This successful repopulation of functional cells would be expected to restore the normal ATP levels as observed after an additional 36 h (108 h in Fig. 6A). In contrast, the same proteins that were severely downregulated with a lethal dose were only moderately downregulated if the mice were primed with a low dose (nephron-autoprotection), meaning that their downregulation was substantially mitigated by the priming dose. In stark contrast, ATP levels recover at 72 h after the lethal dose in autoprotected mice, after repopulation of renal tubules with the new functional cells (144 h after low dose, Fig. 6C). Also, moderate downregulation of GRP75 in the autoprotected mice might minimize many of the morphological and functional consequences of ATP depletion.
Overall, our proteomic findings demonstrate DCVC-induced differential expression patterns of various proteins involved in critical biochemical functions related to renal injury and tissue repair mechanisms and that have functional significance in irreparable loss of renal structure and function after a high dose of DCVC in contrast to replacement and repopulation of renal tubules, leading to recovery of structure and function in autoprotected mice. These findings need further extensive validation to confirm the role of these proteins in compensatory cell division/nephrogenic repair mechanisms in the kidney to avert drug/toxicant-induced ARF.
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The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact
1 ARF due to high dose of DCVC is a lethal disease because renal tissue repair is inhibited by this high dose. In the absence of tissue repair, high dose-induced renal injury progresses culminating in ARF and death. An intervention such as priming with low dose of DCVC (autoprotected group) prevents high dose-induced ARF despite massive injury, indicating the possibility of averting the end-stage disease. In this paper, the course of progression of renal injury until successful avertion to keep it from reaching the end stage can be referred to as ARF-bound injury. ![]()
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